Title
Supreme Court
Commissioner of Internal Revenue vs. Cebu Holdings, Inc.
Case
G.R. No. 189792
Decision Date
Jun 20, 2018
Cebu Holdings sought a tax credit for 2002 overpayment; SC granted partial refund but imposed deficiency tax for 2003 due to unsubstantiated prior credits.

Case Summary (G.R. No. L-17786)

Facts of the Case

Cebu Holdings, Inc., a registered real estate developer, filed its Income Tax Return (ITR) for the taxable year 2002 on April 15, 2003. Within its initial ITR, the respondent indicated an overpayment of P18,992,055.00, opting to receive a tax credit certificate for this excess. Subsequently, the respondent amended its ITR, again asserting the same overpayment. Despite filing a written claim with the Bureau of Internal Revenue (BIR) on March 4, 2005, the petitioner failed to respond, prompting Cebu Holdings to file a Petition for Review with the Court of Tax Appeals (CTA) on April 15, 2005.

Independent CPA Report

To resolve the disputed amounts, the CTA First Division appointed an Independent Certified Public Accountant (CPA) to review the claimed excess credits. The CPA's report verified a total of P15,877,961.02 of creditable taxes, leading to the CTA First Division determining that only P2,083,878.07 was refundable to Cebu Holdings after various disallowances were made, including discrepancies in reported sales and unsubstantiated previous year’s excess credits.

Ruling of the CTA First Division

In its Decision dated November 10, 2008, the CTA First Division affirmed some findings of the CPA while rejecting others based on discrepancies identified in Cebu's reported sales of real estate. Notably, the Court allowed a minor portion of prior year credits while denying a considerably larger part due to lack of substantiation. Ultimately, the court found that the refundable excess taxes amounted to P2,083,878.07.

Ruling of the CTA En Banc

The CTA En Banc upheld the First Division's ruling in its Resolution dated July 29, 2009, affirming that Cebu Holdings was entitled only to the reduced claim of P2,083,878.07 in tax credits. The En Banc also concurred that the claims filed by Cebu Holdings were timely, keeping within the required two-year prescriptive period for filing claims for refunds of excess creditable withholding taxes.

Issues Raised by the Petitioner

The petitioner contested whether Cebu Holdings was entitled to the refund of P2,083,878.07 for excess creditable taxes for 2002 and whether the respondent was liable for deficiency income tax for the taxable year 2003 due to the erroneous carryover of unsubstantiated excess credits.

Court's Ruling on Entitlement and Deficiency

The Supreme Court recognized that Cebu Holdings fulfilled the requirements for claiming a refund of excess creditable withholding taxes. However, it also acknowledged the prior year’s excess credits, which were not substantiated sufficiently enough to be carried forward to the succ

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