Title
Commissioner of Internal Revenue vs. Court of Tax Appeals, 3rd Division
Case
G.R. No. 239464
Decision Date
May 10, 2021
BIR assessed Citysuper for tax deficiencies; CTA partially canceled assessments. SC ruled CTA lacked jurisdiction due to invalid protest, reversing CTA's decision.
A

Case Digest (G.R. No. 214485)

Facts:

  • Assessment Proceedings
    • On April 1, 2013, the Commissioner of Internal Revenue (CIR) issued Letter of Authority No. 116-2013-00000017 to audit Citysuper, Inc.’s (Citysuper) 2011 books.
    • On April 1, 2015, the CIR issued a Preliminary Assessment Notice for deficiency income tax, VAT, withholding tax on compensation (WTC), expanded withholding tax (EWT), and documentary stamp tax (DST), totaling ₱2,083,016,072.43.
    • On April 24, 2015, Citysuper received the Formal Letter of Demand (FLD) and Assessment Notices.
  • Administrative Protest and CTA Petition
    • On April 29, 2015, Citysuper’s representative wrote to the BIR protesting and requesting more time to compile supporting documents.
    • On August 13, 2015, Citysuper filed a Petition for Review under Rule 43 of the Rules of Court before the Court of Tax Appeals (CTA) to cancel the FLD, attaching audit details.
    • On February 29, 2016, Citysuper moved for preferential resolution of the prescription issue; the CIR opposed.
  • Trial on Prescription; CTA Third Division’s Decision
    • Citysuper’s corporate secretary testified that the Board did not authorize Conchita V. Lee to waive prescription.
    • The CIR’s revenue officer testified that Lee signed a waiver extending the assessment period to December 31, 2015, but could not present a notarized authorization letter.
    • On December 15, 2017, the CTA partially granted Citysuper’s petition: it canceled deficiency income tax, VAT, WTC, and EWT assessments for prescription lapses and ordered a full trial on DST.
  • Motions for Reconsideration and Certiorari
    • The CIR filed for reconsideration, arguing (a) lack of CTA jurisdiction because no valid protest was filed; (b) 10-year prescriptive period under Sec. 222(a) IRC for false returns; and (c) validity of the notarized waiver.
    • On March 20, 2018, the CTA denied the motion, applying estoppel by laches (Tijam doctrine).
    • On June 13, 2018, the CIR lodged a Rule 65 petition for certiorari with the Supreme Court, assailing the CTA’s interlocutory orders, the application of laches, and exclusion of Lee’s authorization letter.

Issues:

  • Did the CIR avail the correct remedy against the CTA’s December 15, 2017 and March 20, 2018 Resolutions?
  • Did the CTA gravely abuse its discretion in finding the CIR barred by laches from raising lack of subject-matter jurisdiction?
  • Did the CTA gravely abuse its discretion in refusing to admit Lee’s authorization letter under Rule 132, Section 20 of the Rules of Court?

Ruling:

  • (Subscriber-Only)

Ratio:

  • (Subscriber-Only)

Doctrine:

  • (Subscriber-Only)

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